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10X Genomics perm buffer
Perm Buffer, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/perm+buffer/buffer+perm/pm42106323-210-2-4
Average 86 stars, based on 1 article reviews
perm buffer - by Bioz Stars, 2026-10
86/100 stars

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Related Articles

Staining:

Article Title: Transcriptomic Plasticity of Human Alveolar Macrophages Revealed by Single-Cell RNA Sequencing Following Drug Exposure: Implications for Therapeutic Development.
Article Snippet: Cells from 3 patients (patient IDs 119, 158 and 236) were thawed, counted and 7.5 × 105 cells were cultured as described above, 1.5 mL per well in media (complete DMEM) alone in 24-well plates (Costar 3526) and incubated at 37 ◦C in 5% CO2 for 24 h. The media was aspirated from the wells and immediately replaced with media containing pioglitazone 10 μM, LPS 50 ng/mL or DMSO 1 μL/mL and incubated at 37 ◦C in 5% CO2 for 72 h. Cells were then harvested using trypsin-EDTA as described, counted, and each divided 4 ways for an RNA sample resuspended in 300 μL of RLT lysis buffer (Qiagen RNeasy micro kit) and stored at −20 ◦C for later RNA extraction, or re-cultured and incubated for a further 72 h with pioglitazone 10 μM, LPS 50 ng/mL or DMSO 1 μL/mL in 150 μL per well in 96-well flat-bottomed plate (Costar 3596). .. Live cells were counted in a haemocytometer using trypan blue stain, then centrifuged and resuspended in 1 mL of freshly prepared fixation buffer, containing 1× concentration of 10× concentrated Fix & Perm Buffer (10x Genomics PN2000517) and 4% formaldehyde, and incubated overnight at 4 ◦C. .. Cells were centrifuged at 850× g for 5 min then the fixation buffer was aspirated off and cells were resuspended and mixed gently with 1 mL of chilled 1× concentration of 8× concentrated quenching buffer (10x Genomics PN-2000516).

Article Title: Transcriptomic Plasticity of Human Alveolar Macrophages Revealed by Single-Cell RNA Sequencing Following Drug Exposure: Implications for Therapeutic Development
Article Snippet: .. Live cells were counted in a haemocytometer using trypan blue stain, then centrifuged and resuspended in 1 mL of freshly prepared fixation buffer, containing 1× concentration of 10× concentrated Fix & Perm Buffer (10x Genomics PN-2000517) and 4% formaldehyde, and incubated overnight at 4 °C. .. Cells were centrifuged at 850× g for 5 min then the fixation buffer was aspirated off and cells were resuspended and mixed gently with 1 mL of chilled 1× concentration of 8× concentrated quenching buffer (10x Genomics PN-2000516).

Concentration Assay:

Article Title: Transcriptomic Plasticity of Human Alveolar Macrophages Revealed by Single-Cell RNA Sequencing Following Drug Exposure: Implications for Therapeutic Development.
Article Snippet: Cells from 3 patients (patient IDs 119, 158 and 236) were thawed, counted and 7.5 × 105 cells were cultured as described above, 1.5 mL per well in media (complete DMEM) alone in 24-well plates (Costar 3526) and incubated at 37 ◦C in 5% CO2 for 24 h. The media was aspirated from the wells and immediately replaced with media containing pioglitazone 10 μM, LPS 50 ng/mL or DMSO 1 μL/mL and incubated at 37 ◦C in 5% CO2 for 72 h. Cells were then harvested using trypsin-EDTA as described, counted, and each divided 4 ways for an RNA sample resuspended in 300 μL of RLT lysis buffer (Qiagen RNeasy micro kit) and stored at −20 ◦C for later RNA extraction, or re-cultured and incubated for a further 72 h with pioglitazone 10 μM, LPS 50 ng/mL or DMSO 1 μL/mL in 150 μL per well in 96-well flat-bottomed plate (Costar 3596). .. Live cells were counted in a haemocytometer using trypan blue stain, then centrifuged and resuspended in 1 mL of freshly prepared fixation buffer, containing 1× concentration of 10× concentrated Fix & Perm Buffer (10x Genomics PN2000517) and 4% formaldehyde, and incubated overnight at 4 ◦C. .. Cells were centrifuged at 850× g for 5 min then the fixation buffer was aspirated off and cells were resuspended and mixed gently with 1 mL of chilled 1× concentration of 8× concentrated quenching buffer (10x Genomics PN-2000516).

Article Title: Transcriptomic Plasticity of Human Alveolar Macrophages Revealed by Single-Cell RNA Sequencing Following Drug Exposure: Implications for Therapeutic Development
Article Snippet: .. Live cells were counted in a haemocytometer using trypan blue stain, then centrifuged and resuspended in 1 mL of freshly prepared fixation buffer, containing 1× concentration of 10× concentrated Fix & Perm Buffer (10x Genomics PN-2000517) and 4% formaldehyde, and incubated overnight at 4 °C. .. Cells were centrifuged at 850× g for 5 min then the fixation buffer was aspirated off and cells were resuspended and mixed gently with 1 mL of chilled 1× concentration of 8× concentrated quenching buffer (10x Genomics PN-2000516).

Incubation:

Article Title: Transcriptomic Plasticity of Human Alveolar Macrophages Revealed by Single-Cell RNA Sequencing Following Drug Exposure: Implications for Therapeutic Development.
Article Snippet: Cells from 3 patients (patient IDs 119, 158 and 236) were thawed, counted and 7.5 × 105 cells were cultured as described above, 1.5 mL per well in media (complete DMEM) alone in 24-well plates (Costar 3526) and incubated at 37 ◦C in 5% CO2 for 24 h. The media was aspirated from the wells and immediately replaced with media containing pioglitazone 10 μM, LPS 50 ng/mL or DMSO 1 μL/mL and incubated at 37 ◦C in 5% CO2 for 72 h. Cells were then harvested using trypsin-EDTA as described, counted, and each divided 4 ways for an RNA sample resuspended in 300 μL of RLT lysis buffer (Qiagen RNeasy micro kit) and stored at −20 ◦C for later RNA extraction, or re-cultured and incubated for a further 72 h with pioglitazone 10 μM, LPS 50 ng/mL or DMSO 1 μL/mL in 150 μL per well in 96-well flat-bottomed plate (Costar 3596). .. Live cells were counted in a haemocytometer using trypan blue stain, then centrifuged and resuspended in 1 mL of freshly prepared fixation buffer, containing 1× concentration of 10× concentrated Fix & Perm Buffer (10x Genomics PN2000517) and 4% formaldehyde, and incubated overnight at 4 ◦C. .. Cells were centrifuged at 850× g for 5 min then the fixation buffer was aspirated off and cells were resuspended and mixed gently with 1 mL of chilled 1× concentration of 8× concentrated quenching buffer (10x Genomics PN-2000516).

Article Title: Transcriptomic Plasticity of Human Alveolar Macrophages Revealed by Single-Cell RNA Sequencing Following Drug Exposure: Implications for Therapeutic Development
Article Snippet: .. Live cells were counted in a haemocytometer using trypan blue stain, then centrifuged and resuspended in 1 mL of freshly prepared fixation buffer, containing 1× concentration of 10× concentrated Fix & Perm Buffer (10x Genomics PN-2000517) and 4% formaldehyde, and incubated overnight at 4 °C. .. Cells were centrifuged at 850× g for 5 min then the fixation buffer was aspirated off and cells were resuspended and mixed gently with 1 mL of chilled 1× concentration of 8× concentrated quenching buffer (10x Genomics PN-2000516).

Hybridization:

Article Title: Catecholaminergic neurons boost fibroblast osteogenic activity in keloid.
Article Snippet: .. Fix & Perm Buffer (10X Genomics cat. PN-2000517) at 4°C for 20 h. Afterwards, the fixation was quenched, and the cells were stored at −80°C until probe hybridization. .. Fix & Perm Buffer (10X Genomics cat. PN-2000517) at 4°C for 20 h. Afterwards, the fixation was quenched, and the cells were stored at −80°C until probe hybridization.

Sequencing:

Article Title: Disruption of immune responses by type 1 diabetes exacerbates SARS-CoV-2 mediated lung injury
Article Snippet: .. Samples dedicated to scRNA sequencing were fixed with Fix & Perm Buffer (10x Genomics, PN-2000517) as per manufacturer’s protocol while samples for flow cytometry were fixed in 4% paraformaldehyde (PFA). .. Samples were then washed with PBS and the fixation reaction was quenched. scRNA samples were quenched with Quench Buffer (10x Genomics, PN-2000516) as per the manufacturer’s protocol, while flow cytometry samples were quenched in the solution of 50 mM glycine dissolved in PBS.

Flow Cytometry:

Article Title: Disruption of immune responses by type 1 diabetes exacerbates SARS-CoV-2 mediated lung injury
Article Snippet: .. Samples dedicated to scRNA sequencing were fixed with Fix & Perm Buffer (10x Genomics, PN-2000517) as per manufacturer’s protocol while samples for flow cytometry were fixed in 4% paraformaldehyde (PFA). .. Samples were then washed with PBS and the fixation reaction was quenched. scRNA samples were quenched with Quench Buffer (10x Genomics, PN-2000516) as per the manufacturer’s protocol, while flow cytometry samples were quenched in the solution of 50 mM glycine dissolved in PBS.



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